Abvnx - run a search on this site for knee pain. There are a lot of threads. Some of them are about pain in the knee cap area, some the outside of the knee. That might give you some info. If that doesn't work, I'd be happy to give you some pointers but I need more information, like where exactly in the knee is the pain, is it superficial or deep, what other activities bother it....
Living life like there's no tomorrow.
http://gorgebikefitter.com/
2007 Look Dura Ace
2010 Custom Tonic cross with discs, SRAM
2012 Moots YBB 2 x 10 Shimano XTR
2014 Soma B-Side SS