Are you able to raise your handlebars a bit? That would place your posture a little further back onto your sitbones and off your front bits.
Maybe this happened because when he raised your saddle higher that made you bend down lower to reach the bars- thus putting more pressure on your front girly parts.

Do try a thinner chamois as well- the more stuff and "upholstery" you put between your bits and the saddle front, the less room you'll have, and the more pressure pushing back against you there will be.